The core of WEBKNOSSOS is free. Upgrade for advanced features and tighter collaboration.
Find here a detailed overview of all features and the plans they belong to.
Visualization
BasicFree
Teamfrom 5.000€/ 5.750$
PowerCustom
Open sourceFree
Visualization
Visualization
BasicFree
BasicFree
Teamfrom 5.000€/ 5.750$
Teamfrom 5.000€/ 5.750$
PowerCustom
PowerCustom
Open sourceFree
Open sourceFree
Fast browsing of large 3D imagesAccess and navigate datasets ranging from gigabytes to petabytes directly in your browser on any device, including laptops and iPads. This feature enables seamless collaboration and rapid data access without requiring any installations.
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Visualization
Fast browsing of large 3D imagesAccess and navigate datasets ranging from gigabytes to petabytes directly in your browser on any device, including laptops and iPads. This feature enables seamless collaboration and rapid data access without requiring any installations.
BasicFree
✔️
Teamfrom 5.000€/ 5.750$
✔️
PowerCustom
✔️
Open sourceFree
✔️
3D Meshes visualizationExplore your data in 3D with automatically generated meshes. WEBKNOSSOS generates meshes from volume annotations or pre-computed segmentations.
Ad-hoc and precomputed
Ad-hoc and precomputed
Ad-hoc and precomputed
Ad-hoc
Visualization
3D Meshes visualizationExplore your data in 3D with automatically generated meshes. WEBKNOSSOS generates meshes from volume annotations or pre-computed segmentations.
BasicFree
Ad-hoc and precomputed
Teamfrom 5.000€/ 5.750$
Ad-hoc and precomputed
PowerCustom
Ad-hoc and precomputed
Open sourceFree
Ad-hoc
Render animationsCreate animation of your data.
✔️
✔️
✔️
-
Visualization
Render animationsCreate animation of your data.
BasicFree
✔️
Teamfrom 5.000€/ 5.750$
✔️
PowerCustom
✔️
Open sourceFree
-
Time seriesVisualize and annotate your data in N-dimensions.
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✔️
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Visualization
Time seriesVisualize and annotate your data in N-dimensions.
BasicFree
✔️
Teamfrom 5.000€/ 5.750$
✔️
PowerCustom
✔️
Open sourceFree
✔️
Annotations
Basic
Team
Power
Open source
Annotations
Annotations
Basic
Basic
Team
Team
Power
Power
Open source
Open source
Volume annotationsCreate volume annotations (i.e. segmentations) with manual brush tools. Use the interpolation feature to speed up annotation in 3D. Download the annotations to train a machine learning model or for visualization purposes.
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Annotations
Volume annotationsCreate volume annotations (i.e. segmentations) with manual brush tools. Use the interpolation feature to speed up annotation in 3D. Download the annotations to train a machine learning model or for visualization purposes.
Basic
✔️
Team
✔️
Power
✔️
Open source
✔️
AI-based quick-select toolAccelerate your segmentation workflow with the AI-based quick-select tool, powered by Segment Anything.
✔️
✔️
✔️
-
Annotations
AI-based quick-select toolAccelerate your segmentation workflow with the AI-based quick-select tool, powered by Segment Anything.
Basic
✔️
Team
✔️
Power
✔️
Open source
-
Skeleton annotationsCreate skeleton annotations of neurons, measure their path lengths and organize these skeletons in hierarchical groups. Add comments to specific nodes to highlight areas of interest within your data.
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Annotations
Skeleton annotationsCreate skeleton annotations of neurons, measure their path lengths and organize these skeletons in hierarchical groups. Add comments to specific nodes to highlight areas of interest within your data.
Basic
✔️
Team
✔️
Power
✔️
Open source
✔️
Connectomics proofreadingQuickly fix split and merge errors with the supervoxel graph edit feature. Select a segment to start with and split or merge along the borders of sub-segments of the underlying segmentation.
-
-
✔️
-
Annotations
Connectomics proofreadingQuickly fix split and merge errors with the supervoxel graph edit feature. Select a segment to start with and split or merge along the borders of sub-segments of the underlying segmentation.
Basic
-
Team
-
Power
✔️
Open source
-
Collaborative annotation and project managementSet up tasks for your annotators and use auto-assignment to distribute the work. Keep track of the progress with monitoring reports. Download all created annotations in a merged file for further processing.
-
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Annotations
Collaborative annotation and project managementSet up tasks for your annotators and use auto-assignment to distribute the work. Keep track of the progress with monitoring reports. Download all created annotations in a merged file for further processing.
Basic
-
Team
✔️
Power
✔️
Open source
✔️
Autosave and VersioningWEBKNOSSOS auto-saves annotations every 30s and keeps a versioned history of every action in all annotations. Annotation data on WEBKNOSSOS is externally backed up daily.
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Annotations
Autosave and VersioningWEBKNOSSOS auto-saves annotations every 30s and keeps a versioned history of every action in all annotations. Annotation data on WEBKNOSSOS is externally backed up daily.
Basic
✔️
Team
✔️
Power
✔️
Open source
✔️
Data Handling
Basic
Team
Power
Open source
Data Handling
Data Handling
Basic
Basic
Team
Team
Power
Power
Open source
Open source
Data sharingInvite your colleagues and collaborators to WEBKNOSSOS and share your data with them. Because your data is in the cloud, every dataset and annotation has a link that you can share.
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Data Handling
Data sharingInvite your colleagues and collaborators to WEBKNOSSOS and share your data with them. Because your data is in the cloud, every dataset and annotation has a link that you can share.
Basic
✔️
Team
✔️
Power
✔️
Open source
✔️
Dataset managementUse WEBKNOSSOS as a centralized storage for your large-scale datasets. Fine-grained user access levels and subteams help you manage datasets securely within your organization.
-
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Data Handling
Dataset managementUse WEBKNOSSOS as a centralized storage for your large-scale datasets. Fine-grained user access levels and subteams help you manage datasets securely within your organization.
Basic
-
Team
✔️
Power
✔️
Open source
✔️
Easy import and exportDrag'n'drop data upload and conversion, TIFF export from the UI, and more.
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Data Handling
Easy import and exportDrag'n'drop data upload and conversion, TIFF export from the UI, and more.
Basic
✔️
Team
✔️
Power
✔️
Open source
-
Zarr streamingStream your data from WEBKNOSSOS into other applications, e.g. Neuroglancer. Stream data from cloud storage or HTTP servers into WEBKNOSSOS.
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Data Handling
Zarr streamingStream your data from WEBKNOSSOS into other applications, e.g. Neuroglancer. Stream data from cloud storage or HTTP servers into WEBKNOSSOS.
Basic
✔️
Team
✔️
Power
✔️
Open source
✔️
Automation with PythonUse our webknossos Python package to convert, download, upload, and stream data to automate your workflow and create custom analysis.
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Data Handling
Automation with PythonUse our webknossos Python package to convert, download, upload, and stream data to automate your workflow and create custom analysis.
Basic
✔️
Team
✔️
Power
✔️
Open source
✔️
Hosting
Basic
Team
Power
Open source
Hosting
Hosting
Basic
Basic
Team
Team
Power
Power
Open source
Open source
Worry-free hostingManaged hosting, upgrades, systems monitoring
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✔️
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Hosting
Worry-free hostingManaged hosting, upgrades, systems monitoring
Basic
✔️
Team
✔️
Power
✔️
Open source
-
Deployment optionsWEBKNOSSOS works best when deployed close to the data. Either you upload the data to our server or we install WEBKNOSSOS on your server.
Our server
Our server
Our server, your server or a custom solution
DIY
Hosting
Deployment optionsWEBKNOSSOS works best when deployed close to the data. Either you upload the data to our server or we install WEBKNOSSOS on your server.
Basic
Our server
Team
Our server
Power
Our server, your server or a custom solution
Open source
DIY
Single Sign-On integrationConnect WEBKNOSSOS with your Open ID Connect (OIDC) system
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-
✔️
-
Hosting
Single Sign-On integrationConnect WEBKNOSSOS with your Open ID Connect (OIDC) system
Basic
-
Team
-
Power
✔️
Open source
-
BackupsDaily backups of your annotations.
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✔️
-
Hosting
BackupsDaily backups of your annotations.
Basic
✔️
Team
✔️
Power
✔️
Open source
-
AI Analysis
Basic
Team
Power
Open source
AI Analysis
AI Analysis
Basic
Basic
Team
Team
Power
Power
Open source
Open source
Mitochondria detectionRun our pre-trained machine learning model to detect mitochondria within your EM dataset.
Coming soon
Coming soon
Coming soon
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AI Analysis
Mitochondria detectionRun our pre-trained machine learning model to detect mitochondria within your EM dataset.
Basic
Coming soon
Team
Coming soon
Power
Coming soon
Open source
-
Model trainingTrain machine learning models using your own training data. Continue refining and iterating until you achieve satisfactory segmentation results.
Coming soon
Coming soon
Coming soon
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AI Analysis
Model trainingTrain machine learning models using your own training data. Continue refining and iterating until you achieve satisfactory segmentation results.
Basic
Coming soon
Team
Coming soon
Power
Coming soon
Open source
-
Compute priorityYour plan determines how quickly your data segmentation is processed on our servers, ensuring faster completion times for higher-tier plans.
Low
Medium
High
-
AI Analysis
Compute priorityYour plan determines how quickly your data segmentation is processed on our servers, ensuring faster completion times for higher-tier plans.
Basic
Low
Team
Medium
Power
High
Open source
-
Quotas
Basic
Team
Power
Open source
Quotas
Quotas
Basic
Basic
Team
Team
Power
Power
Open source
Open source
Users
max. 3
5 included+ 500€/575$ per user/year
Custom
Unlimited
Quotas
Users
Basic
max. 3
Team
5 included+ 500€/575$ per user/year
Power
Custom
Open source
Unlimited
StorageRemotely streamed Zarr data does not count against your quota.
max. 50 GB
1 TB included+ 500€/575$ per TB/year
Custom
Your own storage space
Quotas
StorageRemotely streamed Zarr data does not count against your quota.
Basic
max. 50 GB
Team
1 TB included+ 500€/575$ per TB/year
Power
Custom
Open source
Your own storage space
More
Basic
Team
Power
Open source
More
More
Basic
Basic
Team
Team
Power
Power
Open source
Open source
Community dataset galleryFeature your dataset in our publication gallery, making it accessible to the broader scientific community and supporting recognition of your research efforts.
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More
Community dataset galleryFeature your dataset in our publication gallery, making it accessible to the broader scientific community and supporting recognition of your research efforts.
Basic
✔️
Team
✔️
Power
✔️
Open source
-
Links to your data in publicationsEasily link your data in publications with sharing links. The even shorts wklinks enhance clarity and facilitate straight-forward data access and citations.
Sharing link
Sharing link
Sharing link and wklink
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More
Links to your data in publicationsEasily link your data in publications with sharing links. The even shorts wklinks enhance clarity and facilitate straight-forward data access and citations.
Basic
Sharing link
Team
Sharing link
Power
Sharing link and wklink
Open source
-
DOI GenerationGenerate permanent and citable DOIs for your published data and annotations.
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More
DOI GenerationGenerate permanent and citable DOIs for your published data and annotations.
Basic
-
Team
-
Power
✔️
Open source
-
Support
Email support and webinars
Email support and hands-on workshops
More
Support
Basic
Team
Email support and webinars
Power
Email support and hands-on workshops
Open source